The deep checks are the most cPanel-biased part of CSM because they iterate account home directories and per-user public_html trees. On plain Ubuntu/AlmaLinux the account-scan based checks do not run today:
open_basedir, php_config_changes – read EA-PHP php.ini under /opt/cpanel/ea-php*/
perf_wp_config, perf_wp_transients, perf_wp_cron, perf_php_handler – WordPress and PHP handler introspection via cPanel’s EA-PHP layout
Runs on every platform:
filesystem, webshells – fanotify and file-tree scans over /home, /tmp, /dev/shm
rpm_integrity – dispatches to rpm -V on RHEL family or debsums / dpkg --verify on Debian family
waf_status – detects ModSecurity on Apache, Nginx, and LiteSpeed across all supported distros
perf_mysql_config, perf_redis_config, perf_error_logs – rely on standard service locations
A future release may add a config-driven account_roots option so the account-scan checks can iterate generic Linux webroots (/var/www/*, /srv/http/*, etc.). See the project roadmap.